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JASPAR matrix models:
ID name species class family Sequence logo
MA0265.1  ABF1  Saccharomyces cerevisiae   -  - 
MA0266.1  ABF2  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors  - 
MA0267.1  ACE2  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0268.1  ADR1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0269.1  AFT1  Saccharomyces cerevisiae   -  - 
MA0270.1  AFT2  Saccharomyces cerevisiae   -  - 
MA0271.1  ARG80  Saccharomyces cerevisiae   MADS box factors  - 
MA0272.1  ARG81  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0273.1  ARO80  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0274.1  ARR1  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0275.1  ASG1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0276.1  ASH1  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0277.1  AZF1  Saccharomyces cerevisiae   C2H2 zinc finger factors  - 
MA0278.1  BAS1  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0279.1  CAD1  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0280.1  CAT8  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0281.1  CBF1  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH)  - 
MA0282.1  CEP3  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0283.1  CHA4  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0284.1  CIN5  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0285.1  CRZ1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0286.1  CST6  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0287.1  CUP2  Saccharomyces cerevisiae   Copper-fist DNA-binding domain  - 
MA0288.1  CUP9  Saccharomyces cerevisiae   Homeo domain factors  TALE-type homeo domain factors 
MA0289.1  DAL80  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0290.1  DAL81  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0291.1  DAL82  Saccharomyces cerevisiae   -  - 
MA0292.1  ECM22  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0293.1  ECM23  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0294.1  EDS1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0295.1  FHL1  Saccharomyces cerevisiae   Fork head / winged helix factors  Forkhead box (FOX) factors 
MA0296.1  FKH1  Saccharomyces cerevisiae   Fork head / winged helix factors  Forkhead box (FOX) factors 
MA0297.1  FKH2  Saccharomyces cerevisiae   Fork head / winged helix factors  Forkhead box (FOX) factors 
MA0298.1  FZF1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0299.1  GAL4  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0300.1  GAT1  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0301.1  GAT3  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0302.1  GAT4  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0303.1  GCN4  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0304.1  GCR1  Saccharomyces cerevisiae   -  - 
MA0305.1  GCR2  Saccharomyces cerevisiae   -  - 
MA0306.1  GIS1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0307.1  GLN3  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0308.1  GSM1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0309.1  GZF3  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0310.1  HAC1  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0311.1  HAL9  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0312.1  HAP1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0313.1  HAP2  Saccharomyces cerevisiae   Heteromeric CCAAT-binding factors  Heteromeric CCAAT-binding factors 
MA0314.1  HAP3  Saccharomyces cerevisiae   Heteromeric CCAAT-binding factors  Heteromeric CCAAT-binding factors 
MA0316.1  HAP5  Saccharomyces cerevisiae   Heteromeric CCAAT-binding factors  Heteromeric CCAAT-binding factors 
MA0317.1  HCM1  Saccharomyces cerevisiae   Fork head / winged helix factors  Forkhead box (FOX) factors 
MA0318.1  HMRA2  Saccharomyces cerevisiae   Homeo domain factors  TALE-type homeo domain factors 
MA0319.1  HSF1  Saccharomyces cerevisiae   Heat shock factors  HSF factors 
MA0320.1  IME1  Saccharomyces cerevisiae   -  - 
MA0321.1  INO2  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH)  - 
MA0322.1  INO4  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH)  - 
MA0323.1  IXR1  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors  - 
MA0324.1  LEU3  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0325.1  LYS14  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0326.1  MAC1  Saccharomyces cerevisiae   Copper-fist DNA-binding domain  - 
MA0327.1  HMRA1  Saccharomyces cerevisiae   Homeo domain factors  - 
MA0329.1  MBP1  Saccharomyces cerevisiae   APSES-type DNA-binding domain  - 
MA0330.1  MBP1::SWI6  Saccharomyces cerevisiae   APSES-type DNA-binding domain  - 
MA0331.1  MCM1  Saccharomyces cerevisiae   MADS box factors  - 
MA0332.1  MET28  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0333.1  MET31  Saccharomyces cerevisiae   C2H2 zinc finger factors  - 
MA0334.1  MET32  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0335.1  MET4  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0336.1  MGA1  Saccharomyces cerevisiae   Heat shock factors  HSF factors 
MA0337.1  MIG1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0338.1  MIG2  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0339.1  MIG3  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0340.1  MOT3  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0341.1  MSN2  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0342.1  MSN4  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0343.1  NDT80  Saccharomyces cerevisiae   NDT80 domain factors  - 
MA0344.1  NHP10  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors  - 
MA0345.1  NHP6A  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors  - 
MA0346.1  NHP6B  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors  - 
MA0347.1  NRG1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0348.1  OAF1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0349.1  OPI1  Saccharomyces cerevisiae   -  - 
MA0350.1  TOD6  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0351.1  DOT6  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0352.1  PDR1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0353.1  PDR3  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0354.1  PDR8  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0355.1  PHD1  Saccharomyces cerevisiae   APSES-type DNA-binding domain  - 
MA0356.1  PHO2  Saccharomyces cerevisiae   Homeo domain factors  - 
MA0357.1  PHO4  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH)  - 
MA0358.1  PUT3  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0359.1  RAP1  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0360.1  RDR1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0361.1  RDS1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0362.1  RDS2  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0363.1  REB1  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0364.1  REI1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0365.1  RFX1  Saccharomyces cerevisiae   Fork head / winged helix factors  RFX-related factors 
MA0366.1  RGM1  Saccharomyces cerevisiae   C2H2 zinc finger factors  - 
MA0367.1  RGT1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0368.1  RIM101  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0369.1  RLM1  Saccharomyces cerevisiae   MADS box factors  Regulators of differentiation 
MA0370.1  RME1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0371.1  ROX1  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors  - 
MA0372.1  RPH1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0373.1  RPN4  Saccharomyces cerevisiae   C2H2 zinc finger factors  - 
MA0374.1  RSC3  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0375.1  RSC30  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0376.1  RTG3  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH)  - 
MA0377.1  SFL1  Saccharomyces cerevisiae   Heat shock factors  HSF factors 
MA0378.1  SFP1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0379.1  MOT2  Saccharomyces cerevisiae   RING-type zinc finger  - 
MA0380.1  SIP4  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0381.1  SKN7  Saccharomyces cerevisiae   Heat shock factors  HSF factors 
MA0382.1  SKO1  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0383.1  SMP1  Saccharomyces cerevisiae   MADS box factors  Regulators of differentiation 
MA0384.1  SNT2  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0385.1  SOK2  Saccharomyces cerevisiae   APSES-type DNA-binding domain  - 
MA0386.1  SPT15  Saccharomyces cerevisiae   TATA-binding proteins  TBP-related factors 
MA0387.1  SPT2  Saccharomyces cerevisiae   -  - 
MA0388.1  SPT23  Saccharomyces cerevisiae   -  - 
MA0389.1  SRD1  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0390.1  STB3  Saccharomyces cerevisiae   -  - 
MA0391.1  STB4  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0392.1  STB5  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0393.1  STE12  Saccharomyces cerevisiae   -  - 
MA0394.1  STP1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0395.1  STP2  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0396.1  STP3  Saccharomyces cerevisiae   C2H2 zinc finger factors  - 
MA0397.1  STP4  Saccharomyces cerevisiae   C2H2 zinc finger factors  - 
MA0398.1  SUM1  Saccharomyces cerevisiae   A.T hook factors  - 
MA0399.1  SUT1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0400.1  SUT2  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0401.1  SWI4  Saccharomyces cerevisiae   APSES-type DNA-binding domain  - 
MA0402.1  SWI5  Saccharomyces cerevisiae   A.T hook factors  - 
MA0403.1  TBF1  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0404.1  TBS1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0405.1  TEA1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0406.1  TEC1  Saccharomyces cerevisiae   TEA domain factors  - 
MA0407.1  THI2  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0408.1  TOS8  Saccharomyces cerevisiae   Homeo domain factors  TALE-type homeo domain factors 
MA0409.1  TYE7  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH)  - 
MA0410.1  UGA3  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0411.1  UPC2  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0412.1  UME6  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0413.1  USV1  Saccharomyces cerevisiae   C2H2 zinc finger factors  - 
MA0414.1  XBP1  Saccharomyces cerevisiae   -  - 
MA0415.1  YAP1  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0416.1  YAP3  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0417.1  YAP5  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0418.1  YAP6  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0419.1  YAP7  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP)  - 
MA0420.1  ERT1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0421.1  NSI1  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0422.1  URC2  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0423.1  YER130C  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0424.1  YER184C  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0425.1  YGR067C  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0426.1  YHP1  Saccharomyces cerevisiae   Homeo domain factors  - 
MA0428.1  YKL222C  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0429.1  YLL054C  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0430.1  YLR278C  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0431.1  TDA9  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0432.1  YNR063W  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0433.1  YOX1  Saccharomyces cerevisiae   Homeo domain factors  - 
MA0434.1  YPR013C  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0435.1  YPR015C  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0436.1  YPR022C  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0437.1  YPR196W  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0438.1  YRM1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0439.1  YRR1  Saccharomyces cerevisiae   C6 zinc cluster factors  - 
MA0440.1  ZAP1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0441.1  ZMS1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0328.2  MATALPHA2  Saccharomyces cerevisiae S288c   Homeo domain factors  TALE-type homeo domain factors 
MA0929.1  NCU00019  Neurospora crassa   Fork head / winged helix factors  Forkhead box (FOX) factors 
 
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