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JASPAR matrix models:
ID name species class family Sequence logo
MA0265.1  ABF1  Saccharomyces cerevisiae  
MA0266.1  ABF2  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors 
MA0267.1  ACE2  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0268.1  ADR1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0269.1  AFT1  Saccharomyces cerevisiae  
MA0270.1  AFT2  Saccharomyces cerevisiae  
MA0271.1  ARG80  Saccharomyces cerevisiae   MADS box factors 
MA0272.1  ARG81  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0273.1  ARO80  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0274.1  ARR1  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0275.1  ASG1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0276.1  ASH1  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0277.1  AZF1  Saccharomyces cerevisiae   C2H2 zinc finger factors 
MA0278.1  BAS1  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0279.1  CAD1  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0280.1  CAT8  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0281.1  CBF1  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH) 
MA0282.1  CEP3  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0283.1  CHA4  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0284.1  CIN5  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0285.1  CRZ1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0286.1  CST6  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0287.1  CUP2  Saccharomyces cerevisiae   Copper-fist DNA-binding domain 
MA0288.1  CUP9  Saccharomyces cerevisiae   Homeo domain factors  TALE-type homeo domain factors 
MA0289.1  DAL80  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0290.1  DAL81  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0291.1  DAL82  Saccharomyces cerevisiae  
MA0292.1  ECM22  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0293.1  ECM23  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0294.1  EDS1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0295.1  FHL1  Saccharomyces cerevisiae   Fork head / winged helix factors  Forkhead box (FOX) factors 
MA0296.1  FKH1  Saccharomyces cerevisiae   Fork head / winged helix factors  Forkhead box (FOX) factors 
MA0297.1  FKH2  Saccharomyces cerevisiae   Fork head / winged helix factors  Forkhead box (FOX) factors 
MA0298.1  FZF1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0299.1  GAL4  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0300.1  GAT1  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0301.1  GAT3  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0302.1  GAT4  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0303.1  GCN4  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0304.1  GCR1  Saccharomyces cerevisiae  
MA0305.1  GCR2  Saccharomyces cerevisiae  
MA0306.1  GIS1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0307.1  GLN3  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0308.1  GSM1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0309.1  GZF3  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0310.1  HAC1  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0311.1  HAL9  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0312.1  HAP1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0313.1  HAP2  Saccharomyces cerevisiae   Heteromeric CCAAT-binding factors  Heteromeric CCAAT-binding factors 
MA0314.1  HAP3  Saccharomyces cerevisiae   Heteromeric CCAAT-binding factors  Heteromeric CCAAT-binding factors 
MA0316.1  HAP5  Saccharomyces cerevisiae   Heteromeric CCAAT-binding factors  Heteromeric CCAAT-binding factors 
MA0317.1  HCM1  Saccharomyces cerevisiae   Fork head / winged helix factors  Forkhead box (FOX) factors 
MA0318.1  HMRA2  Saccharomyces cerevisiae   Homeo domain factors  TALE-type homeo domain factors 
MA0319.1  HSF1  Saccharomyces cerevisiae   Heat shock factors  HSF factors 
MA0320.1  IME1  Saccharomyces cerevisiae  
MA0321.1  INO2  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH) 
MA0322.1  INO4  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH) 
MA0323.1  IXR1  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors 
MA0324.1  LEU3  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0325.1  LYS14  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0326.1  MAC1  Saccharomyces cerevisiae   Copper-fist DNA-binding domain 
MA0327.1  HMRA1  Saccharomyces cerevisiae   Homeo domain factors 
MA0329.1  MBP1  Saccharomyces cerevisiae   APSES-type DNA-binding domain 
MA0330.1  MBP1::SWI6  Saccharomyces cerevisiae   APSES-type DNA-binding domain 
MA0331.1  MCM1  Saccharomyces cerevisiae   MADS box factors 
MA0332.1  MET28  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0333.1  MET31  Saccharomyces cerevisiae   C2H2 zinc finger factors 
MA0334.1  MET32  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0335.1  MET4  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0336.1  MGA1  Saccharomyces cerevisiae   Heat shock factors  HSF factors 
MA0337.1  MIG1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0338.1  MIG2  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0339.1  MIG3  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0340.1  MOT3  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0341.1  MSN2  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0342.1  MSN4  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0343.1  NDT80  Saccharomyces cerevisiae   NDT80 domain factors 
MA0344.1  NHP10  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors 
MA0345.1  NHP6A  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors 
MA0346.1  NHP6B  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors 
MA0347.1  NRG1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0348.1  OAF1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0349.1  OPI1  Saccharomyces cerevisiae  
MA0350.1  TOD6  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0351.1  DOT6  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0352.1  PDR1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0353.1  PDR3  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0354.1  PDR8  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0355.1  PHD1  Saccharomyces cerevisiae   APSES-type DNA-binding domain 
MA0356.1  PHO2  Saccharomyces cerevisiae   Homeo domain factors 
MA0357.1  PHO4  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH) 
MA0358.1  PUT3  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0359.1  RAP1  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0360.1  RDR1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0361.1  RDS1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0362.1  RDS2  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0363.1  REB1  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0364.1  REI1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0365.1  RFX1  Saccharomyces cerevisiae   Fork head / winged helix factors  RFX-related factors 
MA0366.1  RGM1  Saccharomyces cerevisiae   C2H2 zinc finger factors 
MA0367.1  RGT1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0368.1  RIM101  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0369.1  RLM1  Saccharomyces cerevisiae   MADS box factors  Regulators of differentiation 
MA0370.1  RME1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0371.1  ROX1  Saccharomyces cerevisiae   High-mobility group (HMG) domain factors 
MA0372.1  RPH1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0373.1  RPN4  Saccharomyces cerevisiae   C2H2 zinc finger factors 
MA0374.1  RSC3  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0375.1  RSC30  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0376.1  RTG3  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH) 
MA0377.1  SFL1  Saccharomyces cerevisiae   Heat shock factors  HSF factors 
MA0378.1  SFP1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0379.1  MOT2  Saccharomyces cerevisiae   RING-type zinc finger 
MA0380.1  SIP4  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0381.1  SKN7  Saccharomyces cerevisiae   Heat shock factors  HSF factors 
MA0382.1  SKO1  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0383.1  SMP1  Saccharomyces cerevisiae   MADS box factors  Regulators of differentiation 
MA0384.1  SNT2  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0385.1  SOK2  Saccharomyces cerevisiae   APSES-type DNA-binding domain 
MA0386.1  SPT15  Saccharomyces cerevisiae   TATA-binding proteins  TBP-related factors 
MA0387.1  SPT2  Saccharomyces cerevisiae  
MA0388.1  SPT23  Saccharomyces cerevisiae  
MA0389.1  SRD1  Saccharomyces cerevisiae   Other C4 zinc finger-type factors  GATA-type zinc fingers 
MA0390.1  STB3  Saccharomyces cerevisiae  
MA0391.1  STB4  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0392.1  STB5  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0393.1  STE12  Saccharomyces cerevisiae  
MA0394.1  STP1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0395.1  STP2  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0396.1  STP3  Saccharomyces cerevisiae   C2H2 zinc finger factors 
MA0397.1  STP4  Saccharomyces cerevisiae   C2H2 zinc finger factors 
MA0398.1  SUM1  Saccharomyces cerevisiae   A.T hook factors 
MA0399.1  SUT1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0400.1  SUT2  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0401.1  SWI4  Saccharomyces cerevisiae   APSES-type DNA-binding domain 
MA0402.1  SWI5  Saccharomyces cerevisiae   A.T hook factors 
MA0403.1  TBF1  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0404.1  TBS1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0405.1  TEA1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0406.1  TEC1  Saccharomyces cerevisiae   TEA domain factors 
MA0407.1  THI2  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0408.1  TOS8  Saccharomyces cerevisiae   Homeo domain factors  TALE-type homeo domain factors 
MA0409.1  TYE7  Saccharomyces cerevisiae   Basic helix-loop-helix factors (bHLH) 
MA0410.1  UGA3  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0411.1  UPC2  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0412.1  UME6  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0413.1  USV1  Saccharomyces cerevisiae   C2H2 zinc finger factors 
MA0414.1  XBP1  Saccharomyces cerevisiae  
MA0415.1  YAP1  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0416.1  YAP3  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0417.1  YAP5  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0418.1  YAP6  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0419.1  YAP7  Saccharomyces cerevisiae   Basic leucine zipper factors (bZIP) 
MA0420.1  ERT1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0421.1  NSI1  Saccharomyces cerevisiae   Tryptophan cluster factors  Myb/SANT domain factors 
MA0422.1  URC2  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0423.1  YER130C  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0424.1  YER184C  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0425.1  YGR067C  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0426.1  YHP1  Saccharomyces cerevisiae   Homeo domain factors 
MA0428.1  YKL222C  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0429.1  YLL054C  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0430.1  YLR278C  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0431.1  TDA9  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0432.1  YNR063W  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0433.1  YOX1  Saccharomyces cerevisiae   Homeo domain factors 
MA0434.1  YPR013C  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0435.1  YPR015C  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0436.1  YPR022C  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0437.1  YPR196W  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0438.1  YRM1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0439.1  YRR1  Saccharomyces cerevisiae   C6 zinc cluster factors 
MA0440.1  ZAP1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Factors with multiple dispersed zinc fingers 
MA0441.1  ZMS1  Saccharomyces cerevisiae   C2H2 zinc finger factors  Other factors with up to three adjacent zinc fingers 
MA0328.2  MATALPHA2  Saccharomyces cerevisiae S288c   Homeo domain factors  TALE-type homeo domain factors 
MA0929.1  NCU00019  Neurospora crassa   Fork head / winged helix factors  Forkhead box (FOX) factors 
 
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